Insertion junction: LMJ.RY0402.173451_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173451
Chromosome:chromosome 16
Location:3743005
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g689100 PUS6 (1 of 2) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCAGGCGCGCAATGACAGCACGCGTGC
Internal bar code:AAGCGAGATCAGTGGTGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:99.9443
LEAP-Seq n confirming:1795
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCTAATTAGTGCAGCC
Suggested primer 2:GCTGGACACAGCTCATTCAA