Insertion junction: LMJ.RY0402.173488_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.173488
Chromosome:chromosome 13
Location:3923063
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAACGCAACCGCCGCCAAGGCCCAGTTT
Internal bar code:GATGAAGAAGCCCCGTCAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2038
LEAP-Seq percent confirming:99.7159
LEAP-Seq n confirming:702
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCAGGGTGGTTTAAGGC
Suggested primer 2:AATGTAGCCCCAAAGACACG