Insertion junction: LMJ.RY0402.173488_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173488
Chromosome:chromosome 13
Location:3923743
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTCTGGGCATGTTGGCAACCACTTGTA
Internal bar code:AGGAATCGGGCAGGACATTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:99.4033
LEAP-Seq n confirming:833
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAGAGTGCCTTGTCGTG
Suggested primer 2:TCGACAAGTTTGTGCTGGAC