Insertion junction: LMJ.RY0402.173637_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173637
Chromosome:chromosome 13
Location:3926997
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTCTACCGCGGCCATCGGAAAAACAGC
Internal bar code:AGACAAGGAGCGGGGTAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:99.8624
LEAP-Seq n confirming:2902
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTCCTAGACCTGCCTG
Suggested primer 2:TATTCATTGGCTCGGGACTC