Insertion junction: LMJ.RY0402.173654_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.173654
Chromosome:chromosome 11
Location:2059130
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACACACAGACGGTGGCCAGCGATGATG
Internal bar code:GGAAAACAGATGTGGCGACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:99.6564
LEAP-Seq n confirming:290
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTGACCCGCATTACAC
Suggested primer 2:AAATGGACACGCCCTACAAG