Insertion junction: LMJ.RY0402.173841_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173841
Chromosome:chromosome 9
Location:4663144
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396735 (1 of 1) PTHR18895:SF3 - METHYLTRANSFERASE-LIKE PROTEIN 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCACCACGCTGGCCGCGCCGTACTTGAG
Internal bar code:TAGAACGGCCCGAGCGCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:69.678
LEAP-Seq n confirming:5129
LEAP-Seq n nonconfirming:2232
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTGACCACGAAGTCCT
Suggested primer 2:CGTGAAATGGCGAGTGTATG