Insertion junction: LMJ.RY0402.173988_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.173988
Chromosome:chromosome 17
Location:478361
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g699200 (1 of 1) IPR000104//IPR000626//IPR029071 - Antifreeze protein, type I // Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCCCACCGTGTTCGCATGCCCGCACGT
Internal bar code:TCCGTGGAGCGGGGCCGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:87.5514
LEAP-Seq n confirming:851
LEAP-Seq n nonconfirming:121
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCTTTCGCTTCTACCG
Suggested primer 2:TGGTTTAGTTTGGGGCTTTG