Insertion junction: LMJ.RY0402.174341_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.174341
Chromosome:scaffold 19
Location:153337
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTGTTCTTCAACCAGCGAGCAGCGC
Internal bar code:ATTGCCGGTACGTGAAAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:73.0431
LEAP-Seq n confirming:4479
LEAP-Seq n nonconfirming:1653
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCCACTTCATGTTGTT
Suggested primer 2:ACCAGACCAGACCATCGAAC