Insertion junction: LMJ.RY0402.174454_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.174454
Chromosome:chromosome 8
Location:3925510
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g378400 3'UTR
Cre08.g378417 intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCATCCATCACTGCGGATGTGTGGCT
Internal bar code:TTTTGGGCTTTTATCGCGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:99.3817
LEAP-Seq n confirming:1768
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTTAGGCAGAGGAGGA
Suggested primer 2:GGGTCCGGACTCTCATTGTA