Insertion junction: LMJ.RY0402.174457_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.174457
Chromosome:chromosome 17
Location:2490677
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g716050 (1 of 1) PTHR20953:SF2 - PROTEIN SEEDLING PLASTID DEVELOPMENT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTCTCGCTCACCGCGCTGGAAAGATGC
Internal bar code:CCACGATTTTAATTCCGTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:99.7089
LEAP-Seq n confirming:5138
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACCAGAAATTGTCCA
Suggested primer 2:ACATGTAGCACTCCGTTCCC