Insertion junction: LMJ.RY0402.174645_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.174645
Chromosome:chromosome 10
Location:1239861
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g426650 5'UTR_intron|intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTTGTGCTTCCTCCGGGAGCCCGATGG
Internal bar code:AGTTGTACGTCCTCGGTGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:78.6609
LEAP-Seq n confirming:2890
LEAP-Seq n nonconfirming:784
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGTACACGTCCTCAAAA
Suggested primer 2:TGGTGAGCAGTGGTCTGAAG