Insertion junction: LMJ.RY0402.174719_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.174719
Chromosome:chromosome 7
Location:4501527
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g343500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTAAGCCGTGCCTCCCAGCCTGGCAT
Internal bar code:CGAACGTTCGACCGTTGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:85.1818
LEAP-Seq n confirming:3725
LEAP-Seq n nonconfirming:648
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTCCGCATACAATCCC
Suggested primer 2:ACTGCGACCAGGTAATCCAC