Insertion junction: LMJ.RY0402.174788_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.174788
Chromosome:chromosome 5
Location:3228953
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g239950 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTAGCGGCCCTCTCCCTCCCGGTGCAT
Internal bar code:GAAGCCGGGCATAGTGTGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:99.7279
LEAP-Seq n confirming:733
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAACGTCAGTCCCCATGC
Suggested primer 2:TACCGTGTGTGTGGTGTGTG