Insertion junction: LMJ.RY0402.174824_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.174824
Chromosome:chromosome 9
Location:3648119
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATGCTACTTGTCCACACCAACCGTCG
Internal bar code:TCACGATCGTCGGCCAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:99.6148
LEAP-Seq n confirming:2069
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCCTGTCGTTCTGCTG
Suggested primer 2:GGGAGGAGTTGTGACTTGGA