Insertion junction: LMJ.RY0402.174866_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.174866
Chromosome:chromosome 3
Location:4613873
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g177100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACAACGCCAAACACCCGCCGCCAGCGG
Internal bar code:AGGGACTTCCCATCTAATCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:99.6597
LEAP-Seq n confirming:9664
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGCTGGTACACCTACTC
Suggested primer 2:AGGGTGGTCAAAGAACAACG