Insertion junction: LMJ.RY0402.175007_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.175007
Chromosome:chromosome 14
Location:385187
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g610501 RAA14,SDR34 (1 of 2) IPR002347//IPR003560 - Glucose/ribitol dehydrogenase // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Short-chain dehydrogenase/reductase found in psaA trans-splicing complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGCAATTCGGTTAAACGATTGATTGA
Internal bar code:TTCTGAACGAGTGTGAAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:666
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTAGGGTCTCATGACGG
Suggested primer 2:GTAGTGCCTTCCCTTCCTCC