Insertion junction: LMJ.RY0402.175018_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.175018
Chromosome:chromosome 6
Location:8799423
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g310100 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCGCTTTCCCGCCTGCCGAGTCCTTC
Internal bar code:TGGTTATGTCTGGTTCGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:80.1569
LEAP-Seq n confirming:1022
LEAP-Seq n nonconfirming:253
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTACTCGATGACCTGA
Suggested primer 2:CATAGGGTCCGGAGTAGCAA