Insertion junction: LMJ.RY0402.175022_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.175022
Chromosome:chromosome 4
Location:1270819
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTCAGTTGGGATTCCCCCCCCCCTAAC
Internal bar code:CCCGCGAGGCGTACTGTCCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:52.5838
LEAP-Seq n confirming:753
LEAP-Seq n nonconfirming:679
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGACCCATTTACCAACCA
Suggested primer 2:GAGCTCCGCAACAGTTTCAC