Insertion junction: LMJ.RY0402.175025_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.175025
Chromosome:chromosome 3
Location:1583866
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g152550 (1 of 1) IPR000104//IPR001680//IPR011041//IPR015943//IPR017986//IPR020472//IPR027417 - Antifreeze protein, type I // WD40 repeat // Soluble quinoprotein glucose/sorbosone dehydrogenase // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCATTGCCAGTGCCAGCACCAGTGCCGG
Internal bar code:GGTCCGATCCGGGGGTCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:97.8127
LEAP-Seq n confirming:3980
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCAGCAGTACAAGGAG
Suggested primer 2:GGTTTAGTTTGGGCTGGTGA