Insertion junction: LMJ.RY0402.175062_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.175062
Chromosome:chromosome 16
Location:4832703
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g686200 TSPSP2,TPT1,TPS3,TSSP2 (1 of 2) K16055 - trehalose 6-phosphate synthase/phosphatase (TPS); Triose-phosphTrehalose-6-phosphate synthase/phosphataseate transporter, class II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTGCCCAGCCAGCCTTCCAACCAGGG
Internal bar code:GACGGTTGTTTCGCTATTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:99.2424
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTCTCACCTCCCATTC
Suggested primer 2:CTCTGGTGGTTGTGGTTGTG