Insertion junction: LMJ.RY0402.175148_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.175148
Chromosome:chromosome 9
Location:2121267
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATGAGAACTGCACTAGTGTTGCTGAT
Internal bar code:TGGGGACCGCCTACCAGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:99.5261
LEAP-Seq n confirming:1890
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGACTTGATTGCTTGG
Suggested primer 2:CCCTGATTCGCCTACACACT