Insertion junction: LMJ.RY0402.175321_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.175321
Chromosome:chromosome 9
Location:1357983
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g398652 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCGCCGCGGGTTGGTAGTGGGAGTGT
Internal bar code:CCGTTGCTGCCACCGTGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:92.5489
LEAP-Seq n confirming:20867
LEAP-Seq n nonconfirming:1680
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCACACATCCTTGCTTCTCG
Suggested primer 2:GTGTCGGGTAGGTTTGCAGT