Insertion junction: LMJ.RY0402.175465_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.175465
Chromosome:chromosome 5
Location:3028973
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGCTTGCGCGCTCGCCTGTTCCCTTT
Internal bar code:CCCGTTCGGCACCGGGGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:98.0297
LEAP-Seq n confirming:3234
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGATTCCCAGTTACGTT
Suggested primer 2:TGCCTTGTCTCTCACTGTGG