Insertion junction: LMJ.RY0402.175497_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.175497
Chromosome:chromosome 5
Location:794518
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g248250 (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATTCGTTTTATAAAGGATCATTGGCCT
Internal bar code:TCACTTTCTTACACGATGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:88.9375
LEAP-Seq n confirming:2034
LEAP-Seq n nonconfirming:253
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGACCGTGTGTTAGGAA
Suggested primer 2:CGGTTTAGTTTGGGCTGGTA