Insertion junction: LMJ.RY0402.175608_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.175608
Chromosome:chromosome 8
Location:4579236
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g383000 (1 of 1) IPR000104//IPR001471//IPR016177//IPR031112 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAACTTGGCAAACCCATTTGCAGGTC
Internal bar code:ATTTATCTGCTTACCGGTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:37
LEAP-Seq percent confirming:23.6842
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTATGGATGGGATGGAG
Suggested primer 2:CTACGTGTGCTGTGCATGTG