Insertion junction: LMJ.RY0402.175683_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.175683
Chromosome:chromosome_16
Location:3525283
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre16.g677382 antisense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):CTCAGTCAGCCCGTCACACGAAGCAAAGCC
Internal bar code:TCTTTCTTTTTTGATCACGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:78.5539
LEAP-Seq n confirming:641
LEAP-Seq n nonconfirming:175
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGAAATCGCTGAAAGGAC
Suggested primer 2:GTCTACAGCTGAAGGGGCAG