Insertion junction: LMJ.RY0402.175752_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.175752
Chromosome:chromosome 17
Location:3341073
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g723450 FAP13 WD-repeat Flagellar Associated Protein 13; (1 of 1) IPR001680//IPR007111//IPR017986//IPR020472//IPR027417 - WD40 repeat // NACHT nucleoside triphosphatase // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCGGCCAGCGCCGCCGCAGCCGTATG
Internal bar code:CGTGCGACAGAGTGGTTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:54.7059
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTGTGTACGGCACCAT
Suggested primer 2:GCGCACCACTTTGTCAAGTA