Insertion junction: LMJ.RY0402.175806_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.175806
Chromosome:chromosome 4
Location:1183661
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCACGCCCTGGTAACCGCCCCGCCTA
Internal bar code:TGATTTTTCTGATTTCTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACTTTCAAGAGGCCAG
Suggested primer 2:GATCTGGTGATGACGCATTG