Insertion junction: LMJ.RY0402.175969_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.175969
Chromosome:chromosome 8
Location:3866295
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g377800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACAAAAGCTCCGACTCTGCTGCCCTCC
Internal bar code:CGTTGGAGCCGGAGCGGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:99.5135
LEAP-Seq n confirming:5523
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTGTACTTGCTGCCT
Suggested primer 2:CAGCCCGTATCATCCCTCTA