Insertion junction: LMJ.RY0402.176006_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.176006
Chromosome:chromosome 9
Location:3647491
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390430 (1 of 1) K13108 - smad nuclear-interacting protein 1 (SNIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCAGTAAGGCCACTGCGTCTATCCAT
Internal bar code:ACGGCCTCCCGTGTTAAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:93.1425
LEAP-Seq n confirming:1399
LEAP-Seq n nonconfirming:103
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCCAGTGACTTGTTGT
Suggested primer 2:CATGTGAAAATGGCAGGTTG