Insertion junction: LMJ.RY0402.176006_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.176006
Chromosome:chromosome 9
Location:3647500
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390430 (1 of 1) K13108 - smad nuclear-interacting protein 1 (SNIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCACCTGGCTTTTGCTCCTGGGCCTC
Internal bar code:TCGAACGGCACGGTCTATACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:99.1925
LEAP-Seq n confirming:737
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCCAGTGACTTGTTGT
Suggested primer 2:CATGTGAAAATGGCAGGTTG