Insertion junction: LMJ.RY0402.176088_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.176088
Chromosome:chromosome 17
Location:5069960
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g734805 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTGTCATTCCTCAGCCCGCGGGAGGC
Internal bar code:ATCTCTACGATTACCAATGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:324
LEAP-Seq percent confirming:99.7689
LEAP-Seq n confirming:2590
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACGTTCACCAATGGCTC
Suggested primer 2:CAATTGCGGCTCTTCCTAAG