Insertion junction: LMJ.RY0402.176274_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.176274
Chromosome:chromosome 3
Location:4238030
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCCCGCACCGCGACAGCCACGACCCT
Internal bar code:CAGGCTGCGCGAAGGCAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:57.4573
LEAP-Seq n confirming:1044
LEAP-Seq n nonconfirming:773
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTTATTTCCGTTCCTGCCAC
Suggested primer 2:TGAACATTCGCGCTATCAAG