Insertion junction: LMJ.RY0402.176322_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.176322
Chromosome:chromosome 7
Location:2763061
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g331401 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATCAGTGCGGCAGAGGTGACGTGGGGT
Internal bar code:AGTGACGCGTTCAAGCGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTCCTCACCACCACCT
Suggested primer 2:CATCACATGCTCTCCCACAC