Insertion junction: LMJ.RY0402.176412_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.176412
Chromosome:chromosome 5
Location:875674
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTCACACAAGGGGCGTGGACAGGGCGA
Internal bar code:GTGATCCCGATCAGCGTCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:384
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGGAGGACACCTACCG
Suggested primer 2:TCTCCGACTAGGAACGCTGT