Insertion junction: LMJ.RY0402.176543_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.176543
Chromosome:chromosome 3
Location:8346687
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g198851 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGGTTTGACACATTAATGTGGTGGAA
Internal bar code:GAATGGGCAGTTGTCTCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:84.6875
LEAP-Seq n confirming:271
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTCAATGCTACTCGATG
Suggested primer 2:TTTGTGGCGATAGACAGCAG