Insertion junction: LMJ.RY0402.176785_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.176785
Chromosome:chromosome 6
Location:5857903
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTCCGTTGCCATCACGACCGCCAGCG
Internal bar code:TATATTTTTTGCAGGCGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:99.723
LEAP-Seq n confirming:1800
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCTTAATGCCGCACAC
Suggested primer 2:GTGCAAGTGGGAATCAAGGT