Insertion junction: LMJ.RY0402.176916_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.176916
Chromosome:chromosome 4
Location:2849952
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTCGTGTGGCCAACAACATAGGTGAG
Internal bar code:GTTCGGGGGATCTATGTGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:345
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATAAAGCAGGAGCACA
Suggested primer 2:TTCTTTGTTCCCCCTCACAG