Insertion junction: LMJ.RY0402.176924_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.176924
Chromosome:chromosome 11
Location:2120420
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g469375 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACACTGCACCGCCGCCGCCAAGAGAGC
Internal bar code:GCGTGCGCCCGCTGACTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:430
LEAP-Seq percent confirming:29.8961
LEAP-Seq n confirming:403
LEAP-Seq n nonconfirming:945
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCGAAATACACTGCCA
Suggested primer 2:AAGGACTATGCCGCTCTCAA