Insertion junction: LMJ.RY0402.177097_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.177097
Chromosome:chromosome 4
Location:1993161
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g218700 EIF1,INFA Chloroplast translation initiation factor, IF-1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTTATTGCTGACAAGTTTGCAAAGTT
Internal bar code:TGCCGTGGGGCCTCCCCACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1155
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGCTTACAAAGAAAGCG
Suggested primer 2:GTACGGGGATGGATTCAATG