Insertion junction: LMJ.RY0402.177140_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177140
Chromosome:chromosome 11
Location:2643809
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g476500 PAO7 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTTAGTTTGGGCTGGTATCTACAGCT
Internal bar code:TACAGTTTAGTTATATACTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:850
LEAP-Seq percent confirming:83.6057
LEAP-Seq n confirming:11204
LEAP-Seq n nonconfirming:2197
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAACACGAACACGGACA
Suggested primer 2:GTCTGGTGGGTCTGTCTGGT