Insertion junction: LMJ.RY0402.177177_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177177
Chromosome:chromosome 3
Location:642951
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGCTGGGCGGGGGGACACCGGGTGCG
Internal bar code:ATGGGTATTGGACGAGGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1002
LEAP-Seq percent confirming:95.3095
LEAP-Seq n confirming:6421
LEAP-Seq n nonconfirming:316
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGTCTTCAATCGAGTC
Suggested primer 2:CCTCACACCACGATATGCAC