Insertion junction: LMJ.RY0402.177194_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.177194
Chromosome:chromosome 9
Location:1341119
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g398700 CFA2,CPLD27 (1 of 1) 2.1.1.140 - (S)-coclaurine-N-methyltransferase; coclaurine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCGGTACACCGTGCCCCTCTCGTCCCG
Internal bar code:CGGACGGGTACTTACTTTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:99.6111
LEAP-Seq n confirming:5891
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTCGAAACACCGCCAAC
Suggested primer 2:AGCGTAAGAGAGGGGAGAGG