Insertion junction: LMJ.RY0402.177290_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.177290
Chromosome:chromosome 9
Location:5631521
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCACGTTTCCGCTTGCAGACACCGCA
Internal bar code:CGCCCCCGATACTCTGAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:99.2843
LEAP-Seq n confirming:1526
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGGACTGTGGCTATGG
Suggested primer 2:TGTTATGCTTGCTGCCAGTC