Insertion junction: LMJ.RY0402.177355_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177355
Chromosome:chromosome 8
Location:1036452
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g362076 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTAGTACGTTGGTAAAATACGTTGTG
Internal bar code:CACGACCAAGGCTTCTTTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:64.5062
LEAP-Seq n confirming:627
LEAP-Seq n nonconfirming:345
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGTGAGGGTCTGCCAAC
Suggested primer 2:GGTCAGGGTCATCTACGCAT