Insertion junction: LMJ.RY0402.177647_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177647
Chromosome:chromosome 3
Location:5107589
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g181576 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCCATTTGGTGATCGTCCGTCAGATG
Internal bar code:CGCGTCTTCTCCCCGGAACCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:807
LEAP-Seq percent confirming:98.8806
LEAP-Seq n confirming:530
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGAGTCCCTATTTCTGC
Suggested primer 2:TGGGCAACGTGATAGTGTGT