Insertion junction: LMJ.RY0402.177746_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177746
Chromosome:chromosome 17
Location:5123325
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAACAGTTGCTAAGCGGGCGCTCTACC
Internal bar code:ATTCGGTAGGCCGGAGTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:95.0256
LEAP-Seq n confirming:1299
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCGGGGTTAATGCTGT
Suggested primer 2:GCCAATGTTGATGACCTGTG