Insertion junction: LMJ.RY0402.177769_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177769
Chromosome:chromosome 3
Location:4538131
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g176651 MYSM1 (1 of 1) PF00249//PF01398 - Myb-like DNA-binding domain (Myb_DNA-binding) // JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB); Histone H2A deubiquitinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCTCCCTCCCTCCCTCCAACGCCCCG
Internal bar code:ACTCCGAGCTGGGCTGTCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:5.43478
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:696
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACGATGCTTGGAAACGAAT
Suggested primer 2:CACTACTCGCAGACGACGAC