Insertion junction: LMJ.RY0402.177798_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177798
Chromosome:chromosome 6
Location:6565672
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g293516 DEGO2 (1 of 4) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC; Inactive Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCTCAACACAAGCTTGTGATGCCCTA
Internal bar code:CTTGGCGGCCTGCCGGAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:95.7395
LEAP-Seq n confirming:3573
LEAP-Seq n nonconfirming:159
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGATGATGATGAGGCG
Suggested primer 2:GTGAACTTCTGGAACGCCAT