Insertion junction: LMJ.RY0402.177798_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.177798
Chromosome:chromosome 6
Location:6565673
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g293516 DEGO2 (1 of 4) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC; Inactive Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGACGTATGTGTGTGCCTTTGTAGTAT
Internal bar code:TCCCGAGGCTACCATTCTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:98.7034
LEAP-Seq n confirming:609
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGATGATGATGAGGCG
Suggested primer 2:GTGAACTTCTGGAACGCCAT